What genes are in the Homologous DNA Pairing and Strand Exchange pathway?

The Homologous DNA Pairing and Strand Exchange pathway involves 10 genes. Key genes include: ATM, BARD1, BLM, BRCA1, CHEK1, DNA2, RAD51, RBBP8, SEM1, WRN.

Homologous DNA Pairing and Strand Exchange

Q: What compounds affect the Homologous DNA Pairing and Strand Exchange pathway?

65 compounds in the BiohacksAI corpus have documented interactions with genes in the Homologous DNA Pairing and Strand Exchange pathway (Reactome ID: R-HSA-5693579). These compounds target 10 genes within this pathway.

REACTOME PATHWAY

Reactome: R-HSA-569357910 genes65 compounds

The Homologous DNA Pairing and Strand Exchange pathway (Reactome ID: R-HSA-5693579) involves 10 genes and is affected by 65 compounds in the BiohacksAI evidence corpus. Compound-pathway associations are derived from target overlap: a compound is linked to this pathway if it targets ≥2 genes within the pathway.

Genes in this Pathway

ATM BARD1 BLM BRCA1 CHEK1 DNA2 RAD51 RBBP8 SEM1 WRN

Compounds Affecting Homologous DNA Pairing and Strand Exchange

#	Compound	Targets Hit	Studies
1	Methotrexate	—	289
2	Astemizole Antihistamine drug now withdrawn from	—	280
3	Azacitidine	—	298
4	Azacitidine	—	300
5	Calcimycin	—	216
6	Chlorhexidine	—	299
7	Ciclopirox	—	88
8	Colchicine	—	300
9	colchine	—	2
10	cycloheximide	—	300
11	Cytarabine	—	297
12	Demecolcine	—	246
13	Digitoxigenin 3 beta,14-Dihydroxy-5 beta-card-20(22)enolide.	—	300
14	Digoxigenin 3 beta,12 beta,14-Trihydroxy-5 beta-card-20(22)-enolide.	—	300
15	dihydrorotenone	—	13
16	Fluspirilene	—	74
17	gedunin	—	54
18	Hexachlorophene	—	300
19	lidoflazine	—	278
20	Melphalan	—	300
21	Niclosamide	—	299
22	Nocodazole Nocodazole is	—	215
23	paxilline	—	42
24	Podophyllotoxin	—	14
25	rafoxanide	—	172
26	Strophanthidin 3 beta,5,14-Trihydroxy-19-oxo-5 beta-card-20(22)-enolide.	—	300
27	Trifluridine	—	295
28	Tubercidin	—	300
29	vinblastine sulfate	—	81
30	Luteolin 5,7,3',4'-tetrahydroxy-flavone,	—	150
31	myricetin-3-O-galactopyranoside [Supplementary Concept]	—	300
32	Methylene Blue	—	200
33	Levodopa	—	297
34	streptonigrin	—	299
35	Apigenin 5,7,4'-trihydroxy-flavone,	—	300
36	Resveratrol	—	298
37	calycosin	—	300
38	Semustine 4-Methyl derivative of LOMUSTINE; (CCNU).	—	97
39	Thiabendazole 2-Substituted benzimidazole first introduced in 1962. It is active against	—	299
40	Aurintricarboxylic Acid	—	184
41	Daunorubicin	—	298
42	Quercetin	—	300
43	Estramustine	—	300
44	Idarubicin	—	299
45	juglone hydroxylase [Supplementary Concept] catalyzes	—	279
46	DEAD-box RNA Helicases	—	169
47	Thioctic Acid	—	298
48	Rosmarinic Acid	—	300
49	Dihydroxyphenylalanine	—	300
50	Vitamin K 3	—	300

About the Homologous DNA Pairing and Strand Exchange Pathway

The Homologous DNA Pairing and Strand Exchange pathway is catalogued in Reactome (ID: R-HSA-5693579) and involves 10 genes. In the BiohacksAI corpus, 65 compounds have documented interactions with at least 2 genes in this pathway, establishing mechanistic relevance. Key pathway genes include ATM, BARD1, BLM, BRCA1, CHEK1.